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Publication : Control of organ-specific demethylation by an element of the T-cell receptor-alpha locus control region.

First Author  Santoso B Year  2000
Journal  J Biol Chem Volume  275
Issue  3 Pages  1952-8
PubMed ID  10636897 Mgi Jnum  J:124842
Mgi Id  MGI:3722594 Doi  10.1074/jbc.275.3.1952
Citation  Santoso B, et al. (2000) Control of organ-specific demethylation by an element of the T-cell receptor-alpha locus control region. J Biol Chem 275(3):1952-8
abstractText  DNA methylation is important for mammalian development and the control of gene expression. Recent data suggest that DNA methylation causes chromatin closure and gene silencing. During development, tissue specifically expressed gene loci become selectively demethylated in the appropriate cell types by poorly understood processes. Locus control regions (LCRs), which are cis-acting elements providing stable, tissue-specific expression to linked transgenes in chromatin, may play a role in tissue-specific DNA demethylation. We studied the methylation status of the LCR for the mouse T-cell receptor alpha/delta locus using a novel assay for scanning large distances of DNA for methylation sites. Tissue-specific functions of this LCR depend largely on two DNase I-hypersensitive site clusters (HS), HS1 (T-cell receptor alpha enhancer) and HS1'. We report that these HS induce lymphoid organ-specific DNA demethylation in a region located 3.8 kilobases away with little effect on intervening, methylated DNA. This demethylation is impaired in mice with a germline deletion of the HS1/HS1' clusters. Using 5'-deletion mutants of a transgenic LCR reporter gene construct, we show that HS1' can act in the absence of HS1 to direct this tissue-specific DNA demethylation event. Thus, elements of an LCR can control tissue-specific DNA methylation patterns both in transgenes and inside its native locus.
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