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Publication : The Tandem Duplicator Phenotype Is a Prevalent Genome-Wide Cancer Configuration Driven by Distinct Gene Mutations.

First Author  Menghi F Year  2018
Journal  Cancer Cell Volume  34
Issue  2 Pages  197-210.e5
PubMed ID  30017478 Mgi Jnum  J:264231
Mgi Id  MGI:6195936 Doi  10.1016/j.ccell.2018.06.008
Citation  Menghi F, et al. (2018) The Tandem Duplicator Phenotype Is a Prevalent Genome-Wide Cancer Configuration Driven by Distinct Gene Mutations. Cancer Cell 34(2):197-210.e5
abstractText  The tandem duplicator phenotype (TDP) is a genome-wide instability configuration primarily observed in breast, ovarian, and endometrial carcinomas. Here, we stratify TDP tumors by classifying their tandem duplications (TDs) into three span intervals, with modal values of 11 kb, 231 kb, and 1.7 Mb, respectively. TDPs with approximately 11 kb TDs feature loss of TP53 and BRCA1. TDPs with approximately 231 kb and approximately 1.7 Mb TDs associate with CCNE1 pathway activation and CDK12 disruptions, respectively. We demonstrate that p53 and BRCA1 conjoint abrogation drives TDP induction by generating short-span TDP mammary tumors in genetically modified mice lacking them. Lastly, we show how TDs in TDP tumors disrupt heterogeneous combinations of tumor suppressors and chromatin topologically associating domains while duplicating oncogenes and super-enhancers.
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