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Publication : Microbiota Diurnal Rhythmicity Programs Host Transcriptome Oscillations.

First Author  Thaiss CA Year  2016
Journal  Cell Volume  167
Issue  6 Pages  1495-1510.e12
PubMed ID  27912059 Mgi Jnum  J:238064
Mgi Id  MGI:5818069 Doi  10.1016/j.cell.2016.11.003
Citation  Thaiss CA, et al. (2016) Microbiota Diurnal Rhythmicity Programs Host Transcriptome Oscillations. Cell 167(6):1495-1510.e12
abstractText  The intestinal microbiota undergoes diurnal compositional and functional oscillations that affect metabolic homeostasis, but the mechanisms by which the rhythmic microbiota influences host circadian activity remain elusive. Using integrated multi-omics and imaging approaches, we demonstrate that the gut microbiota features oscillating biogeographical localization and metabolome patterns that determine the rhythmic exposure of the intestinal epithelium to different bacterial species and their metabolites over the course of a day. This diurnal microbial behavior drives, in turn, the global programming of the host circadian transcriptional, epigenetic, and metabolite oscillations. Surprisingly, disruption of homeostatic microbiome rhythmicity not only abrogates normal chromatin and transcriptional oscillations of the host, but also incites genome-wide de novo oscillations in both intestine and liver, thereby impacting diurnal fluctuations of host physiology and disease susceptibility. As such, the rhythmic biogeography and metabolome of the intestinal microbiota regulates the temporal organization and functional outcome of host transcriptional and epigenetic programs.
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