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Publication : Single Cell and Open Chromatin Analysis Reveals Molecular Origin of Epidermal Cells of the Skin.

First Author  Fan X Year  2018
Journal  Dev Cell Volume  47
Issue  1 Pages  21-37.e5
PubMed ID  30220568 Mgi Jnum  J:272386
Mgi Id  MGI:6284173 Doi  10.1016/j.devcel.2018.08.010
Citation  Fan X, et al. (2018) Single Cell and Open Chromatin Analysis Reveals Molecular Origin of Epidermal Cells of the Skin. Dev Cell 47(1):21-37.e5
abstractText  How embryonic progenitors coordinate cell fate specification and establish transcriptional and signaling competence is a fundamental question in developmental biology. Here, we show that transcription factor DeltaNp63 profoundly changes the transcriptome and remodels thousands of open chromatin regions of Krt8+ progenitors during epidermal fate specification. ATAC-seq and single-cell RNA-seq reveal that DeltaNp63-dependent programs govern epidermal lineage formation, and DeltaNp63-independent programs, mediated by AP2 and AP1 transcription factors, promote epidermal differentiation and epithelial-to-mesenchymal transition. DeltaNp63 promotes Wnt signaling by directly upregulating Wnt ligands, Frizzled receptors, and transcription factors. Deletion of beta-catenin in Krt8+ progenitors delays their maturation into Krt5+ progenitors. The lack of epidermal Wnt production in the absence of DeltaNp63 also incapacitates Wnt activation in the underlying dermal cells. These findings reveal the remarkable changes of the transcriptome, open chromatin, and signaling pathways at the onset of skin development and uncover the molecular cascade for epidermal lineage formation.
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