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Publication : Convergence of oncogenic cooperation at single-cell and single-gene levels drives leukemic transformation.

First Author  Liu Y Year  2021
Journal  Nat Commun Volume  12
Issue  1 Pages  6323
PubMed ID  34732703 Mgi Jnum  J:314703
Mgi Id  MGI:6826740 Doi  10.1038/s41467-021-26582-4
Citation  Liu Y, et al. (2021) Convergence of oncogenic cooperation at single-cell and single-gene levels drives leukemic transformation. Nat Commun 12(1):6323
abstractText  Cancers develop from the accumulation of somatic mutations, yet it remains unclear how oncogenic lesions cooperate to drive cancer progression. Using a mouse model harboring NRas(G12D) and EZH2 mutations that recapitulates leukemic progression, we employ single-cell transcriptomic profiling to map cellular composition and gene expression alterations in healthy or diseased bone marrows during leukemogenesis. At cellular level, NRas(G12D) induces myeloid lineage-biased differentiation and EZH2-deficiency impairs myeloid cell maturation, whereas they cooperate to promote myeloid neoplasms with dysregulated transcriptional programs. At gene level, NRas(G12D) and EZH2-deficiency independently and synergistically deregulate gene expression. We integrate results from histopathology, leukemia repopulation, and leukemia-initiating cell assays to validate transcriptome-based cellular profiles. We use this resource to relate developmental hierarchies to leukemia phenotypes, evaluate oncogenic cooperation at single-cell and single-gene levels, and identify GEM as a regulator of leukemia-initiating cells. Our studies establish an integrative approach to deconvolute cancer evolution at single-cell resolution in vivo.
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