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Publication : Bookmarking by Non-pioneer Transcription Factors during Liver Development Establishes Competence for Future Gene Activation.

First Author  Karagianni P Year  2020
Journal  Cell Rep Volume  30
Issue  5 Pages  1319-1328.e6
PubMed ID  32023452 Mgi Jnum  J:288474
Mgi Id  MGI:6415953 Doi  10.1016/j.celrep.2020.01.006
Citation  Karagianni P, et al. (2020) Bookmarking by Non-pioneer Transcription Factors during Liver Development Establishes Competence for Future Gene Activation. Cell Rep 30(5):1319-1328.e6
abstractText  Transcription factor binding to enhancer and promoter regions critical for homeostatic adult gene activation is established during development. To understand how cell-specific gene expression patterns are generated, we study the developmental timing of association of two prominent hepatic transcription factors with gene regulatory regions. Most individual binding events display extraordinarily high temporal variations during liver development. Early and persistent binding is necessary, but not sufficient, for gene activation. Stable gene expression patterns are the result of combinatorial activity of multiple transcription factors, which mark regulatory regions long before activation and promote progressive broadening of active chromatin domains. Both temporally stable and dynamic, short-lived binding events contribute to the developmental maturation of active promoter configurations. The results reveal a developmental bookmarking function of master regulators and illuminate remarkable parallels between the principles employed for gene activation during development, during evolution, and upon mitotic exit.
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