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Publication : Airn transcriptional overlap, but not its lncRNA products, induces imprinted Igf2r silencing.

First Author  Latos PA Year  2012
Journal  Science Volume  338
Issue  6113 Pages  1469-72
PubMed ID  23239737 Mgi Jnum  J:192011
Mgi Id  MGI:5463815 Doi  10.1126/science.1228110
Citation  Latos PA, et al. (2012) Airn transcriptional overlap, but not its lncRNA products, induces imprinted Igf2r silencing. Science 338(6113):1469-72
abstractText  Mammalian imprinted genes often cluster with long noncoding (lnc) RNAs. Three lncRNAs that induce parental-specific silencing show hallmarks indicating that their transcription is more important than their product. To test whether Airn transcription or product silences the Igf2r gene, we shortened the endogenous lncRNA to different lengths. The results excluded a role for spliced and unspliced Airn lncRNA products and for Airn nuclear size and location in silencing Igf2r. Instead, silencing only required Airn transcriptional overlap of the Igf2r promoter, which interferes with RNA polymerase II recruitment in the absence of repressive chromatin. Such a repressor function for lncRNA transcriptional overlap reveals a gene silencing mechanism that may be widespread in the mammalian genome, given the abundance of lncRNA transcripts.
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