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Publication : Trans-omics Impact of Thymoproteasome in Cortical Thymic Epithelial Cells.

First Author  Ohigashi I Year  2019
Journal  Cell Rep Volume  29
Issue  9 Pages  2901-2916.e6
PubMed ID  31775054 Mgi Jnum  J:292070
Mgi Id  MGI:6445453 Doi  10.1016/j.celrep.2019.10.079
Citation  Ohigashi I, et al. (2019) Trans-omics Impact of Thymoproteasome in Cortical Thymic Epithelial Cells. Cell Rep 29(9):2901-2916.e6
abstractText  The thymic function to produce self-protective and self-tolerant T cells is chiefly mediated by cortical thymic epithelial cells (cTECs) and medullary TECs (mTECs). Recent studies including single-cell transcriptomic analyses have highlighted a rich diversity in functional mTEC subpopulations. Because of their limited cellularity, however, the biochemical characterization of TECs, including the proteomic profiling of cTECs and mTECs, has remained unestablished. Utilizing genetically modified mice that carry enlarged but functional thymuses, here we show a combination of proteomic and transcriptomic profiles for cTECs and mTECs, which identified signature molecules that characterize a developmental and functional contrast between cTECs and mTECs. Our results reveal a highly specific impact of the thymoproteasome on proteasome subunit composition in cTECs and provide an integrated trans-omics platform for further exploration of thymus biology.
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