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Publication : ZFR coordinates crosstalk between RNA decay and transcription in innate immunity.

First Author  Haque N Year  2018
Journal  Nat Commun Volume  9
Issue  1 Pages  1145
PubMed ID  29559679 Mgi Jnum  J:260739
Mgi Id  MGI:6149440 Doi  10.1038/s41467-018-03326-5
Citation  Haque N, et al. (2018) ZFR coordinates crosstalk between RNA decay and transcription in innate immunity. Nat Commun 9(1):1145
abstractText  Control of type I interferon production is crucial to combat infection while preventing deleterious inflammatory responses, but the extent of the contribution of post-transcriptional mechanisms to innate immune regulation is unclear. Here, we show that human zinc finger RNA-binding protein (ZFR) represses the interferon response by regulating alternative pre-mRNA splicing. ZFR expression is tightly controlled during macrophage development; monocytes express truncated ZFR isoforms, while macrophages induce full-length ZFR to modulate macrophage-specific alternative splicing. Interferon-stimulated genes are constitutively activated by ZFR depletion, and immunostimulation results in hyper-induction of interferon beta (IFNbeta/IFNB1). Through whole-genome analyses, we show that ZFR controls interferon signaling by preventing aberrant splicing and nonsense-mediated decay of histone variant macroH2A1/H2AFY mRNAs. Together, our data suggest that regulation of ZFR in macrophage differentiation guards against aberrant interferon responses and reveal a network of mRNA processing and decay that shapes the transcriptional response to infection.
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