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Publication : Prediction of intracellular targets of a small compound by analyzing peptides presented on MHC class I.

First Author  Sugimoto Y Year  2019
Journal  Biochem Biophys Res Commun Volume  508
Issue  2 Pages  480-486
PubMed ID  30503339 Mgi Jnum  J:291103
Mgi Id  MGI:6442689 Doi  10.1016/j.bbrc.2018.11.089
Citation  Sugimoto Y, et al. (2019) Prediction of intracellular targets of a small compound by analyzing peptides presented on MHC class I. Biochem Biophys Res Commun 508(2):480-486
abstractText  In chemical biology, the elucidation of chemical target is crucial for successful drug development. Because MHC class I molecules present peptides from intracellular damaged proteins, it might be possible to identify targets of a chemical by analyzing peptide sequences on MHC class I. Therefore, we treated cells with the autophagy-inducing chemical TMD-457 and identified the peptides presented on MHC class I. Many of the peptides were derived from molecules involved in ER trafficking and ER stress, which were confirmed by morphological and biochemical analyses. Therefore, our results demonstrate that analyzing MHC class I peptides is useful for the detection of chemical targets.
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