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Publication : Directed Evolution of a Selective and Sensitive Serotonin Sensor via Machine Learning.

First Author  Unger EK Year  2020
Journal  Cell Volume  183
Issue  7 Pages  1986-2002.e26
PubMed ID  33333022 Mgi Jnum  J:349539
Mgi Id  MGI:6490172 Doi  10.1016/j.cell.2020.11.040
Citation  Unger EK, et al. (2020) Directed Evolution of a Selective and Sensitive Serotonin Sensor via Machine Learning. Cell 183(7):1986-2002.e26
abstractText  Serotonin plays a central role in cognition and is the target of most pharmaceuticals for psychiatric disorders. Existing drugs have limited efficacy; creation of improved versions will require better understanding of serotonergic circuitry, which has been hampered by our inability to monitor serotonin release and transport with high spatial and temporal resolution. We developed and applied a binding-pocket redesign strategy, guided by machine learning, to create a high-performance, soluble, fluorescent serotonin sensor (iSeroSnFR), enabling optical detection of millisecond-scale serotonin transients. We demonstrate that iSeroSnFR can be used to detect serotonin release in freely behaving mice during fear conditioning, social interaction, and sleep/wake transitions. We also developed a robust assay of serotonin transporter function and modulation by drugs. We expect that both machine-learning-guided binding-pocket redesign and iSeroSnFR will have broad utility for the development of other sensors and in vitro and in vivo serotonin detection, respectively.
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