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Publication : Deletion of ultraconserved elements yields viable mice.

First Author  Ahituv N Year  2007
Journal  PLoS Biol Volume  5
Issue  9 Pages  e234
PubMed ID  17803355 Mgi Jnum  J:128347
Mgi Id  MGI:3766841 Doi  10.1371/journal.pbio.0050234
Citation  Ahituv N, et al. (2007) Deletion of ultraconserved elements yields viable mice. PLoS Biol 5(9):e234
abstractText  Ultraconserved elements have been suggested to retain extended perfect sequence identity between the human, mouse, and rat genomes due to essential functional properties. To investigate the necessities of these elements in vivo, we removed four noncoding ultraconserved elements (ranging in length from 222 to 731 base pairs) from the mouse genome. To maximize the likelihood of observing a phenotype, we chose to delete elements that function as enhancers in a mouse transgenic assay and that are near genes that exhibit marked phenotypes both when completely inactivated in the mouse and when their expression is altered due to other genomic modifications. Remarkably, all four resulting lines of mice lacking these ultraconserved elements were viable and fertile, and failed to reveal any critical abnormalities when assayed for a variety of phenotypes including growth, longevity, pathology, and metabolism. In addition, more targeted screens, informed by the abnormalities observed in mice in which genes in proximity to the investigated elements had been altered, also failed to reveal notable abnormalities. These results, while not inclusive of all the possible phenotypic impact of the deleted sequences, indicate that extreme sequence constraint does not necessarily reflect crucial functions required for viability.
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