|  Help  |  About  |  Contact Us

Allele : Nfkbia<tm1.1Pjc> nuclear factor of kappa light polypeptide gene enhancer in B cells inhibitor, alpha; targeted mutation 1.1, Paul J Chiao

Primary Identifier  MGI:4829878 Allele Type  Targeted
Attribute String  Modified regulatory region Gene  Nfkbia
Transmission  Germline Strain of Origin  Not Specified
Is Recombinase  false Is Wild Type  false
molecularNote  Two well defined NFKB binding sites (M1 and M2) and 4 NFKB like binding sites (M3 - M6) in the promoter region were mutated, a FLAG tag was attached to exon 1, and a floxed neo cassette was inserted in intron 1 via homologous recombination. Cre mediated recombination removed the neo cassette. The locations of and mutations in the 6 binding sites are as follows: -115 - -93, a TCC motif changed to a CCG (M1); -143 - -122, a CCC motif changed to an AGT (M2); -227 - -205, a TCT motif changed to a CAC (M3); -292 - -271, a CC motif changed to a AA (M4); -319 - -297, a GGG motif changed to a TTT (M5); -387 - -365, a CCC motif changed to a GGG (M6). Chromatin immunoprecipitation analysis confirmed the loss of kappa B enhancer function in MEFs from homozygous mice.
  • mutations:
  • Nucleotide substitutions,
  • Insertion
  • synonyms:
  • IkBa<M>,
  • IkBa<M>,
  • IkappaBalpha<M>,
  • IkappaBalpha<M>
Quick Links:
 
Quick Links:
 

1 Feature

Trail: Allele

Genome

0 Expresses

0 Mutation Involves

Phenotype

Mouse alleles --> Mammalian phenotypes (MP terms)

 

Other

1 Carried By

Trail: Allele

0 Driven By

6 Publication categories

Trail: Allele