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Publication : Sequential Enhancer Sequestration Dysregulates Recombination Center Formation at the IgH Locus.

First Author  Qiu X Year  2018
Journal  Mol Cell Volume  70
Issue  1 Pages  21-33.e6
PubMed ID  29576529 Mgi Jnum  J:262040
Mgi Id  MGI:6157125 Doi  10.1016/j.molcel.2018.02.020
Citation  Qiu X, et al. (2018) Sequential Enhancer Sequestration Dysregulates Recombination Center Formation at the IgH Locus. Mol Cell 70(1):21-33.e6
abstractText  Immunoglobulin heavy-chain (IgH) genes are assembled by DNA rearrangements that juxtapose a variable (VH), a diversity (DH), and a joining (JH) gene segment. Here, we report that in the absence of intergenic control region 1 (IGCR1), the intronic enhancer (Emu) associates with the next available CTCF binding site located close to VH81X via putative heterotypic interactions involving YY1 and CTCF. The alternate Emu/VH81X loop leads to formation of a distorted recombination center and altered DH rearrangements and disrupts chromosome conformation that favors distal VH recombination. Cumulatively, these features drive highly skewed, Emu-dependent recombination of VH81X. Sequential deletion of CTCF binding regions on IGCR1-deleted alleles suggests that they influence recombination of single proximal VH gene segments. Our observations demonstrate that Emu interacts differently with IGCR1- or VH-associated CTCF binding sites and thereby identify distinct roles for insulator-like elements in directing enhancer activity.
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