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Publication : De novo protein identification in mammalian sperm using in situ cryoelectron tomography and AlphaFold2 docking.

First Author  Chen Z Year  2023
Journal  Cell Volume  186
Issue  23 Pages  5041-5053.e19
PubMed ID  37865089 Mgi Jnum  J:342625
Mgi Id  MGI:7550275 Doi  10.1016/j.cell.2023.09.017
Citation  Chen Z, et al. (2023) De novo protein identification in mammalian sperm using in situ cryoelectron tomography and AlphaFold2 docking. Cell 186(23):5041-5053.e19
abstractText  To understand the molecular mechanisms of cellular pathways, contemporary workflows typically require multiple techniques to identify proteins, track their localization, and determine their structures in vitro. Here, we combined cellular cryoelectron tomography (cryo-ET) and AlphaFold2 modeling to address these questions and understand how mammalian sperm are built in situ. Our cellular cryo-ET and subtomogram averaging provided 6.0-A reconstructions of axonemal microtubule structures. The well-resolved tertiary structures allowed us to unbiasedly match sperm-specific densities with 21,615 AlphaFold2-predicted protein models of the mouse proteome. We identified Tektin 5, CCDC105, and SPACA9 as novel microtubule-associated proteins. These proteins form an extensive interaction network crosslinking the lumen of axonemal doublet microtubules, suggesting their roles in modulating the mechanical properties of the filaments. Indeed, Tekt5 -/- sperm possess more deformed flagella with 180 degrees bends. Together, our studies presented a cellular visual proteomics workflow and shed light on the in vivo functions of Tektin 5.
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