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Publication : Cloning and evaluation of RALGDS as a candidate for the tuberous sclerosis gene TSC1.

First Author  Humphrey D Year  1997
Journal  Ann Hum Genet Volume  61
Issue  Pt 4 Pages  299-305
PubMed ID  9365783 Mgi Jnum  J:43812
Mgi Id  MGI:1098971 Doi  10.1046/j.1469-1809.1997.6140299.x
Citation  Humphrey D, et al. (1997) Cloning and evaluation of RALGDS as a candidate for the tuberous sclerosis gene TSC1. Ann Hum Genet 61(Pt 4):299-305
abstractText  RALGDS is a 115 kDa protein which was identified by its ability to enhance guanine nucleotide exchange for the ras family member ral. It also binds to activated ras and rap1, and appears to function as part of a signalling complex in downstream events following rap1 activation. Here we report the identification of full-length cDNA clones for human RALGDS, isolated from a brain cDNA library. The predicted protein has strong sequence homology to rat and murine isoforms of RALGDS in the N- and C-terminal regions, but an internal region (aa 250-380) shows relatively high divergence with only 42% identical amino acid residues. The human RALGDS gene is contained within a 30 kb region of 9q34, approximately 200 kb proximal to the ABO gene, within the current critical region for the tuberous sclerosis gene TSC1. Partial genomic structure was determined; it consists of at least 11 exons. Based upon analysis of Southern blots from 110 TSC patients, genomic DNA SSCP analysis, and RT-PCR analysis which demonstrated RNA expression of both alleles in patients from 9q34-linked TSC families using intragenic polymorphisms, we conclude that RALGDS is not likely to be TSC1.
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