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Publication : A polymorphism in the mouse crg-2/IP-10 gene complicates chemokine gene expression analysis using a commercial ribonuclease protection assay.

First Author  Hallensleben W Year  2000
Journal  J Immunol Methods Volume  234
Issue  1-2 Pages  149-51
PubMed ID  10669779 Mgi Jnum  J:60300
Mgi Id  MGI:1353143 Doi  10.1016/s0022-1759(99)00197-0
Citation  Hallensleben W, et al. (2000) A polymorphism in the mouse crg-2/IP-10 gene complicates chemokine gene expression analysis using a commercial ribonuclease protection assay. J Immunol Methods 234(1-2):149-51
abstractText  The use of multiprobe RPAs is becoming an increasingly popular method for the detection and quantitation of RNA levels in cells and tissues. Here we report that due to a polymorphism in the 3'-noncoding region of the mouse Crg-2/IP-10 gene, the mCK-5 chemokine probe set available from Pharmingen can yield aberrant signal patterns with RNA samples from BALB/c, MRL and possibly other mouse strains that may lead to false conclusions regarding expression of the Crg-2/IP-10 and MCP-1 genes.
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