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Publication : Polymorphism of the mouse TNF-alpha locus: sequence studies of the 3'-untranslated region and first intron.

First Author  Beutler B Year  1993
Journal  Gene Volume  129
Issue  2 Pages  279-83
PubMed ID  8100792 Mgi Jnum  J:13317
Mgi Id  MGI:61518 Doi  10.1016/0378-1119(93)90280-g
Citation  Beutler B, et al. (1993) Polymorphism of the mouse TNF-alpha locus: sequence studies of the 3'-untranslated region and first intron [published erratum appears in Gene 1993 Dec 22;136(1-2):379]. Gene 129(2):279-83
abstractText  We have sequenced the 3'-untranslated region (3'-UTR) and first intron of six strains of Mus musculus, as well as M. spretus, M. castaneus, and M. shanghai. A marked degree of polymorphism was evident in the sequences, and among all of the strains, no two haplotypes were identical. Of particular note, insertional mutations modifying the 5'-TTATTTAT sequence in the 3'-UTR, which in its RNA form acts as a translational repressor, were observed in New Zealand White and M. spretus strains. The mutations that we have identified dictate several restriction-fragment length polymorphisms, which should be useful in following the tumor necrosis factor-encoding gene (TNF) in backcross analysis and in defining the ancestry of TNF in mice of indeterminate parentage. Moreover, the data provide a substrate for the future analysis of differences in the level of TNF expression by genetically distinct mice.
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