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Publication : Evolution of a mammalian promoter through changes in patterns of transcription factor binding.

First Author  Singh N Year  1998
Journal  J Mol Evol Volume  46
Issue  6 Pages  639-48
PubMed ID  9608046 Mgi Jnum  J:48410
Mgi Id  MGI:1267303 Doi  10.1007/pl00006344
Citation  Singh N, et al. (1998) Evolution of a mammalian promoter through changes in patterns of transcription factor binding. J Mol Evol 46(6):639-48
abstractText  Previously, we identified evolutionarily derived changes in the pattern of nuclear factor binding to overlapping sites (termed A, B, and C, in proximal to distal order) within the promoter region of the murine D7Rp2e gene. In Mus domesticus, strong binding occurs at site B, with weak binding at sites A and C; in M. pahari, strong binding is observed at sites A and C, with weak binding at site B. The M. pahari-specific occupancy pattern is associated with repression of transcription. Presently, we have identified two interspecies changes, a single A --> G substitution within site B and a 7-bp indel within site C, that are primary determinants of the interspecies differences. These mutations alter both the pattern of binding site occupancy and the ability to repress transcription. The results are discussed in terms of a model involving a dynamic equilibrium between states of binding site occupancy, the nature of which can be modified during evolution.
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