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Publication : Genomic imprinting controls matrix attachment regions in the Igf2 gene.

First Author  Weber M Year  2003
Journal  Mol Cell Biol Volume  23
Issue  24 Pages  8953-9
PubMed ID  14645508 Mgi Jnum  J:86872
Mgi Id  MGI:2682189 Doi  10.1128/MCB.23.24.8953-8959.2003
Citation  Weber M, et al. (2003) Genomic imprinting controls matrix attachment regions in the Igf2 gene. Mol Cell Biol 23(24):8953-9
abstractText  Genomic imprinting at the Igf2/H19 locus originates from allele-specific DNA methylation, which modifies the affinity of some proteins for their target sequences. Here, we show that AT-rich DNA sequences located in the vicinity of previously characterized differentially methylated regions (DMRs) of the imprinted Igf2 gene are conserved between mouse and human. These sequences have all the characteristics of matrix attachment regions (MARs), which are known as versatile regulatory elements involved in chromatin structure and gene expression. Combining allele-specific nuclear matrix binding assays and real-time PCR quantification, we show that retention of two of these Igf2 MARs (MAR0 and MAR2) in the nuclear matrix fraction depends on the tissue and is specific to the paternal allele. Furthermore, on this allele, the Igf2 MAR2 is functionally linked to the neighboring DMR2 while, on the maternal allele, it is controlled by the imprinting-control region. Our work clearly demonstrates that genomic imprinting controls matrix attachment regions in the Igf2 gene.
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