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Publication : Visualization of a DNA-PK/PARP1 complex.

First Author  Spagnolo L Year  2012
Journal  Nucleic Acids Res Volume  40
Issue  9 Pages  4168-77
PubMed ID  22223246 Mgi Jnum  J:197727
Mgi Id  MGI:5494381 Doi  10.1093/nar/gkr1231
Citation  Spagnolo L, et al. (2012) Visualization of a DNA-PK/PARP1 complex. Nucleic Acids Res 40(9):4168-77
abstractText  The DNA-dependent protein kinase (DNA-PK) and Poly(ADP-ribose) polymerase-1 (PARP1) are critical enzymes that reduce genomic damage caused by DNA lesions. They are both activated by DNA strand breaks generated by physiological and environmental factors, and they have been shown to interact. Here, we report in vivo evidence that DNA-PK and PARP1 are equally necessary for rapid repair. We purified a DNA-PK/PARP1 complex loaded on DNA and performed electron microscopy and single particle analysis on its tetrameric and dimer-of-tetramers forms. By comparison with the DNA-PK holoenzyme and fitting crystallographic structures, we see that the PARP1 density is in close contact with the Ku subunit. Crucially, PARP1 binding elicits substantial conformational changes in the DNA-PK synaptic dimer assembly. Taken together, our data support a functional, in-pathway role for DNA-PK and PARP1 in double-strand break (DSB) repair. We also propose a NHEJ model where protein-protein interactions alter substantially the architecture of DNA-PK dimers at DSBs, to trigger subsequent interactions or enzymatic reactions.
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