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Publication : A global regulatory mechanism for activating an exon network required for neurogenesis.

First Author  Raj B Year  2014
Journal  Mol Cell Volume  56
Issue  1 Pages  90-103
PubMed ID  25219497 Mgi Jnum  J:215543
Mgi Id  MGI:5605607 Doi  10.1016/j.molcel.2014.08.011
Citation  Raj B, et al. (2014) A global regulatory mechanism for activating an exon network required for neurogenesis. Mol Cell 56(1):90-103
abstractText  The vertebrate and neural-specific Ser/Arg (SR)-related protein nSR100/SRRM4 regulates an extensive program of alternative splicing with critical roles in nervous system development. However, the mechanism by which nSR100 controls its target exons is poorly understood. We demonstrate that nSR100-dependent neural exons are associated with a unique configuration of intronic cis-elements that promote rapid switch-like regulation during neurogenesis. A key feature of this configuration is the insertion of specialized intronic enhancers between polypyrimidine tracts and acceptor sites that bind nSR100 to potently activate exon inclusion in neural cells while weakening 3' splice site recognition and contributing to exon skipping in nonneural cells. nSR100 further operates by forming multiple interactions with early spliceosome components bound proximal to 3' splice sites. These multifaceted interactions achieve dominance over neural exon silencing mediated by the splicing regulator PTBP1. The results thus illuminate a widespread mechanism by which a critical neural exon network is activated during neurogenesis.
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