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Publication : Complete overview of protein-inactivating sequence variations in 36 sequenced mouse inbred strains.

First Author  Timmermans S Year  2017
Journal  Proc Natl Acad Sci U S A Volume  114
Issue  34 Pages  9158-9163
PubMed ID  28784771 Mgi Jnum  J:244295
Mgi Id  MGI:5913074 Doi  10.1073/pnas.1706168114
Citation  Timmermans S, et al. (2017) Complete overview of protein-inactivating sequence variations in 36 sequenced mouse inbred strains. Proc Natl Acad Sci U S A 114(34):9158-9163
abstractText  Mouse inbred strains remain essential in science. We have analyzed the publicly available genome sequences of 36 popular inbred strains and provide lists for each strain of protein-coding genes that acquired sequence variations that cause premature STOP codons, loss of STOP codons and single nucleotide polymorphisms, and short in-frame insertions and deletions. Our data give an overview of predicted defective proteins, including predicted impact scores, of all these strains compared with the reference mouse genome of C57BL/6J. These data can also be retrieved via a searchable website (mousepost.be) and allow a global, better interpretation of genetic background effects and a source of naturally defective alleles in these 36 sequenced classical and high-priority mouse inbred strains.
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