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Publication : ERCC1-XPF cooperates with CTCF and cohesin to facilitate the developmental silencing of imprinted genes.

First Author  Chatzinikolaou G Year  2017
Journal  Nat Cell Biol Volume  19
Issue  5 Pages  421-432
PubMed ID  28368372 Mgi Jnum  J:246103
Mgi Id  MGI:5920679 Doi  10.1038/ncb3499
Citation  Chatzinikolaou G, et al. (2017) ERCC1-XPF cooperates with CTCF and cohesin to facilitate the developmental silencing of imprinted genes. Nat Cell Biol 19(5):421-432
abstractText  Inborn defects in DNA repair are associated with complex developmental disorders whose causal mechanisms are poorly understood. Using an in vivo biotinylation tagging approach in mice, we show that the nucleotide excision repair (NER) structure-specific endonuclease ERCC1-XPF complex interacts with the insulator binding protein CTCF, the cohesin subunits SMC1A and SMC3 and with MBD2; the factors co-localize with ATRX at the promoters and control regions (ICRs) of imprinted genes during postnatal hepatic development. Loss of Ercc1 or exposure to MMC triggers the localization of CTCF to heterochromatin, the dissociation of the CTCF-cohesin complex and ATRX from promoters and ICRs, altered histone marks and the aberrant developmental expression of imprinted genes without altering DNA methylation. We propose that ERCC1-XPF cooperates with CTCF and cohesin to facilitate the developmental silencing of imprinted genes and that persistent DNA damage triggers chromatin changes that affect gene expression programs associated with NER disorders.
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