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Publication : Single cell sequencing of the mouse anterior palate reveals mesenchymal heterogeneity.

First Author  Ozekin YH Year  2023
Journal  Dev Dyn Volume  252
Issue  6 Pages  713-727
PubMed ID  36734036 Mgi Jnum  J:337005
Mgi Id  MGI:7493541 Doi  10.1002/dvdy.573
Citation  Ozekin YH, et al. (2023) Single cell sequencing of the mouse anterior palate reveals mesenchymal heterogeneity. Dev Dyn 252(6):713-727
abstractText  BACKGROUND: Cleft palate is one of the most prevalent birth defects. Mice are useful for studying palate development because of their morphological and genetic similarities to humans. In mice, palate development occurs between embryonic days (E)11.5 to 15.5. Single cell transcriptional profiles of palate cell populations have been a valuable resource for the craniofacial research community, but we lack a single cell transcriptional profile for anterior palate at E13.5, at the transition from proliferation to shelf elevation. RESULTS: A detailed single cell RNA sequencing analysis reveals heterogeneity in expression profiles of the cell populations of the E13.5 anterior palate. Hybridization chain reaction RNA fluorescent in situ hybridization (HCR RNA FISH) reveals epithelial populations segregate into layers. Mesenchymal populations spatially segregate into four domains. One of these mesenchymal populations expresses ligands and receptors distinct from the rest of the mesenchyme, suggesting that these cells have a unique function. RNA velocity analysis shows two terminal cell states that contribute to either the proximal or distal palatal regions emerge from a single progenitor pool. CONCLUSION: This single cell resolution expression data and detailed analysis from E13.5 anterior palate provides a powerful resource for mechanistic insight into secondary palate morphogenesis for the craniofacial research community.
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