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Publication : Gene expression profiling of mouse epidermal keratinocytes.

First Author  García-Escudero R Year  2010
Journal  Methods Mol Biol Volume  585
Pages  171-81 PubMed ID  19908004
Mgi Jnum  J:356706 Mgi Id  MGI:7762798
Doi  10.1007/978-1-60761-380-0_13 Citation  Garcia-Escudero R, et al. (2010) Gene expression profiling of mouse epidermal keratinocytes. Methods Mol Biol 585:171-81
abstractText  DNA microarray technology is a powerful tool for genome-wide gene expression analysis of biological samples including skin and epidermal keratinocytes. Here we review the methodology for expression profiling analysis of skin tissue or purified keratinocytes from mice. We explained the methodology and protocols for RNA preservation and purification, RNA quality and integrity tests, and DNA microarray technology types that can be used. Furthermore, using a data set of mice samples, we explained how to perform chip raw data preprocessing and normalization, differential expression analysis, gene-clustering and functional analysis of gene deregulation.
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