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HT Experiment :

Experiment Id  GSE80222 Name  Polycomb Ezh2 controls the fate of GABAergic neurons in the embryonic cerebellum
Experiment Type  RNA-Seq Study Type  WT vs. Mutant
Source  GEO Curation Date  2022-05-06
description  Genetic ablation of Ezh2 in Pax7-Cre driven lineages resulted in developmental defects in E13.5 cerebellum. The transcriptional change and H3K27me3 mark change were investigated by RNA-seq and ChIP-seq on H3K27me3. The Ezh2 gene was genetically ablated by crossing Ezh2 flox allele line and Pax7-Cre line mice, which resulted in Ezh2 gene deletion in embryonic cerebellum. To aid the precise dissection of embryonic cerebellum. A Rosa-YFP allele was also breeded along with the Ezh2 flox allele. E13.5 cerebella were dissected, then immediatedly dropped into RNAlater for mRNA abstraction and RNA-seq, or fixed with 1%PFA for H3K27me3 ChIP-seq assay.
  • variables:
  • bulk RNA-seq,
  • genotype

1 Publications

Trail: HTExperiment

10 Samples

Trail: HTExperiment