Experiment Id | GSE117784 | Name | Reprogram-Seq: A platform for single-cell combinatorial reprogramming [I] |
Experiment Type | RNA-Seq | Study Type | Baseline |
Source | GEO | Curation Date | 2022-03-15 |
description | Reprogram-Seq leverages organ-specific cell atlas data with single-cell perturbation and computational analysis to predict, evaluate, and optimize TF combinations that reprogram a cell type of interest. Focusing on the cardiac system, we performed Reprogram-Seq on P0 mouse heart cells to generate a reference transcriptomic map. Based on the reference map, we selected TF candidates and tests 1000s of TF cocktails for direct lineage conversion by scRNA-Seq. |