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HT Experiment :

Experiment Id  E-GEOD-11992 Series Id  GSE11992
Name  Liver gene expression profiling of cytosolic malic enzyme knockout mice Experiment Type  transcription profiling by array
Study Type  WT vs. Mutant Source  ArrayExpress
Curation Date  2019-05-24
description  Cytosolic malic enzyme (Me1) was predicted as a causal gene for abdominal using a novel statistical method named LCMS (Schadt et al., 2005, Nature Genetics). In order to validate this prediction, we profiled the liver tissues of Me1 knockout mice (Me1-/-) and their littermate wild-type (wt) controls to examine the gene expression signature as well as pathways/networks resulting from the single gene perturbation. 3 Me1-/- mice and 5 wt controls were profiled. Reference pool included RNA extracted from the liver of 5 wt control mice. Dye-swap was involved in the profiling.
  • variables:
  • genotype

1 Publications

Trail: HTExperiment

16 Samples

Trail: HTExperiment