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HT Experiment :

Experiment Id  E-GEOD-46207 Series Id  GSE46207
Name  Impairment of Muscle Regeneration in Muscleblind-like 3 Isoform Knockout Mice Experiment Type  RNA-Seq
Study Type  WT vs. Mutant Source  ArrayExpress
Curation Date  2017-10-06
description  We have performed an RNA-seq experiment to identify expression and alternative splicing differences between WT and Mbnl3 isoform knockout mice E15 forelimbs. We have also identified and characterized transcriptome wide Mbnl3-binding sites in C2C12 cells and E15 forelimbs. 6 total samples were analyzed: E15 forelimbs from 3 WT and 3 MBNL3 delta 2/deltaE2 female mice (15dpc). For HITS-CLIP, 3 samples each of C2C12 cells, WT E15 forelimbs and Mbnl3 deltaE2 forelimbs were analyzed for Mbnl3 binding site analysis.
  • variables:
  • genotype,
  • bulk RNA-seq

1 Publications

Trail: HTExperiment

15 Samples

Trail: HTExperiment