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HT Experiment :

Experiment Id  E-GEOD-38497 Series Id  GSE38497
Name  Muscleblind-Like 2 mediated alternative splicing in the developing brain by mRNA sequencing Experiment Type  RNA-Seq
Study Type  WT vs. Mutant Source  ArrayExpress
Curation Date  2019-01-30
description  We have identified Mbnl2 mediated splicing events and mRNA expression regulation by comparing WT and Mbnl2 deltaE2/deltaE2 mouse hippocampii using Affymetrix Mouse Exon Junction Array and mRNA sequencing. The splicing microarray data has already been submitted under GSE37908 which also includes a re-analysis of RNA-seq data. The TableS1.xls contains Splicing microarray analysis data of Mbnl2+/+ vs. MBNL2 deltaE2/deltaE22 knockout hippocampus. The TableS2.xls files contain RNA-Seq, Gene Ontology, HITS-CLIP and CIMS summary of Mbnl2+/+ vs. MBNL2 deltaE2/deltaE2 knockout hippocampus. The file contents are descibed in the 'TableS1_S2_readme.pdf' and data processing details are included in the 'data_processing_readme.pdf' file. 6 total samples were analyzed: brains from 3 WT and 3 MBNL2 deltaE2/deltaE2 female mice, all 2-3 months of age.
  • variables:
  • genotype,
  • bulk RNA-seq

1 Publications

Trail: HTExperiment

6 Samples

Trail: HTExperiment