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HT Experiment :

Experiment Id  GSE113069 Name  The subiculum is a patchwork of discrete subregions
Experiment Type  RNA-Seq Study Type  Baseline
Source  GEO Curation Date  2022-07-21
description  Subiculum pyramidal cells constitute a prominent output neuron class of the hippocampus. Here, we examined diversity in this cell type using single-cell RNA-seq. Examination of subiculum pyramidal cell transcriptomes. Please note that there are total 28 samples from scRNA-seq, representing Read 1 and Read 2 of 14 datasets. The metadata.txt (with 1344 rows) contains the information on each well (96 well plate) for the 14 datasets (1344 = 96 X 14). For the combinedTables.txt, the analysis only retained wells that were not control wells (e.g., not empty, not spike-in as annotated in metadata.txt as such), resulted in 1190 cells (included in the further analysis after removing these wells). The column headers/names represent the original dataset they emerged from.
  • variables:
  • anatomical structure,
  • single cell RNA-seq

1 Publications

Trail: HTExperiment

28 Samples

Trail: HTExperiment