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HT Experiment :

Experiment Id  GSE180040 Name  Galnt17 loss-of-function leads to developmental delay, abnormal coordination, activity, and social interactions, with cerebellar vermis pathology
Experiment Type  RNA-Seq Study Type  WT vs. Mutant
Source  GEO Curation Date  2025-01-06
description  GALNT17 encodes a N-acetylgalactosaminyltransferase (GalNAc-T) protein specifically involved in mucin-type O-linked glycosylation of target proteins, a process important for cell adhesion, cell signaling, neurotransmitter activity, neurite outgrowth, and neurite sensing. GALNT17, also known as WBSCR17, is located at the edge of the Williams-Beuren Syndrome (WBS) critical region and adjacent to the AUTS2 locus, genomic regions associated with neurodevelopmental phenotypes that are thought to be co-regulated. Although previous data have implicated Galnt17 in neurodevelopment, the in vivo functions of this gene have not been investigated. In this study, we have analyzed behavioral, brain pathology, and molecular phenotypes exhibited by Galnt17 knockout (Galnt17-/-) mice. We show that Galnt17-/- mutants exhibit developmental neuropathology within the cerebellar vermis, along with abnormal activity, coordination, and social interaction deficits. Transcriptomic and protein analysis revealed reductions in both mucin type O-glycosylation and heparan sulfate synthesis in the developing mutant cerebellum along with disruption of pathways central to neuron differentiation, axon pathfinding, and synaptic signaling, consistent with the mutant neuropathology. These brain and behavioral phenotypes and molecular data confirm a specific role for Galnt17 in brain development and suggest new clues to factors that could contribute to phenotypes in certain WBS and AUTS2 syndrome patients. RNA Sequencing was performed on RNA samples collected from individual cerebellums of male, 14-day old (P14), mice. Two mouse strains were sampled in biological triplicate, Wbscr17-/- and B6C3 w/t control. Paired end RNA Libraries were prepared and sequenced on a Hiseq 4000 sequencer with a read length of 2x150bp.
  • variables:
  • bulk RNA-seq,
  • genotype

1 Publications

Trail: HTExperiment

6 Samples

Trail: HTExperiment