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HT Experiment :

Experiment Id  GSE68150 Series Id  E-GEOD-68150
Name  Transcriptome comparison of oocytes obtained from in vitro culture and in vivo Experiment Type  RNA-Seq
Study Type  Baseline Source  GEO
Curation Date  2023-12-07
description  The comparison of trancriptomes was part of the study by Pfender, Kuznetsov, Pasternak et al, titled: "Live imaging RNAi screen reveals genes essential for meiosis in mammalian oocytes". The goal was to check if the oocytes cultured in vitro in follicles (for RNAi studies) correspond to real gametes obtained directly from mice (in vivo). Apart from functional experiments showing that they can be fertilized and develop into an embryo, we also compared transcriptomes of those oocytes. 3 samples of 50 oocytes were collected for both groups of in vitro and in vivo grown oocytes.
  • variables:
  • bulk RNA-seq

1 Publications

Trail: HTExperiment

6 Samples

Trail: HTExperiment