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HT Experiment :

Experiment Id  GSE192740 Name  Spatial proteogenomics reveals distinct and evolutionarily-conserved hepatic macrophage niches (single cells)
Experiment Type  RNA-Seq Study Type  Baseline
Source  GEO Curation Date  2024-02-15
description  Analysis of CITE-seq data , Nuclei RNA-seq data and single cell RNA-seq data on CD45+ and CD45- cells isolated from the livers of mice fed a standard diet (SD) or western diet (WD; fat, cholesterol and sugar), from healthy and steatotic human livers, from hamster liver, pig liver, chicken liver, monkey liver and zebrafish liver. We also performed Spatial Transcriptomics analysis on heatlhy mouse livers, NAFLD mouse livers, healthy human livers and steatotic human livers. Single cell RNA Seq = Liver CD45+ and CD45- cells derived from mice fed a standard diet (SD) or western diet (WD; fat, cholesterol and sugar). Liver CD45+ and CD45- cells derived from healthy and obese humans. 10,Visium,Spatial,Seq,=,mouse,StSt,liver,,mouse,StSt,capsule,,mouse,NAFLD,liver,,,human,non-steatotic,liver,,human,steatotic,liver
  • variables:
  • cell type,
  • single cell RNA-seq,
  • species,
  • age

2 Publications

Trail: HTExperiment

132 Samples

Trail: HTExperiment