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HT Experiment :

Experiment Id  E-MTAB-615 Name  RNA-seq of whole-brain tissue from 16 laboratory mouse strains as part of the Mouse Genomes Project at Wellcome Trust Sanger Institute
Experiment Type  RNA-Seq Study Type  Baseline
Source  ArrayExpress Curation Date  2018-01-17
description  The Mouse Genomes Project ( http://www.sanger.ac.uk/science/data/mouse-genomes-project ) uses next-generation sequencing technologies to catalogue molecular variation in the common laboratory mouse strains, and a selected set of wild-derived inbred strains. Access to complete sequence of multiple inbred strains will add to these resources and will become a permanent foundation for a systems biology approach to phenotypic variation in the mouse. In this particular study, we have sequenced the transcriptome of whole-brain tissue from 16 laboratory mouse strains to examine differences in gene expression levels, differential RNA-editing, and for use in de novo gene prediction.
  • variables:
  • bulk RNA-seq,
  • mouse strain

1 Publications

Trail: HTExperiment

15 Samples

Trail: HTExperiment