| First Author | Maltais LJ | Year | 1994 |
| Journal | Mouse Genome | Volume | 92 |
| Pages | 62-85 | Mgi Jnum | J:23411 |
| Mgi Id | MGI:71318 | Citation | Maltais LJ, et al. (1994) Locus Map of mouse. Mouse Genome 92:62-85 |
| abstractText | TITLE PAGE ONLY LOCUS MAP OF MOUSE Lois J. Maltais, Donald P. Doolittle, Thomas H. Roderick, Alan L. Hillyard, Muriel T. Davisson CONVENTIONS USED ON THE MAP Solid vertical bars represent the chromosomes and are drawn to their proportional lengths based on an estimated total haploid length of 16OOcM. Chromosomes numbers are shown above the centromeres which are represented by knobs. Nucleolus organizers are symbolized by NO, except on Chrs 11, 12, 15, 16 and 18 where a ribosomal RNA locus has been mapped using a DNA polymorphism and are symbolized by Rnr (RNA, ribosomal). Locus symbols are given at the right of the chromosome bars. Numbers to the left of the chromosomes are estimated distances in cM from the centromere. The resolution of the current map is 1 cM. The distances between centromeres and proximal markers in some chromosomes have been determined using Robertsonian chromosomes and may be underestimated. Genes listed at the bottoms of chromosomes have been assigned to those chromosomes by parasexual methods or are just known to be liked to those chromosomes. The map is compiled from female and male linkage data and recombinant inbred strain data. We calculate a weighted average using the reciprocal of the variance. Some further conventions are used to show the relative certainty of position of a locus and the relationships of loci. Positions of some loci are well known from three-point crosses and extensive data. These anchor loci are indicated by lines extending through the chromosome bars and beyond all others to the left and the symbol is printed in boldface. The shorter lines through the chromosome indicate loci whose order is known with less assurance. When a locus is mapped with respect to only one other locus, the symbol of the locating locus is added to parentheses. When a locus is known to be near another but recombination values are not known, the new locus is placed next to the linked locus but no line is drawn to the chromosome. Characters in square brackets indicate the cytological (band) location of parasexually mapped loci. When more than one locus maps to the same position, the loci are listed on the same line and, if one is an anchor locus, its symbol is given first. An upward caret (A) means the locus or loci following it belong in the line above; two carets (AA) means two lines above, etc. The construct locus A (@locus 6) indicates that locus A has been mapped relative to locus B by physical mapping methods. NOTES ON USEFUL DATA FOR MAPPING Published linkage data, to be combined, must include the following: the type of cross, the phase (coupling or repulsion) of the loci involved when it is appropriate, the sex of the F1 parent in backcrosses, the number of recombinants, and the total number examined. It is important to indicate whether new data include formerly published information or information in Mouse Genome so that the compilers of the map will not use data twice. We appreciate preprints of reprints of articles or abstracts that have mapping data. Your assistance helps greatly in keeping the map current and complete. Please quote original sources when referring to linkage data. Maintenance of the map was formerly supported by the Howard Hughes Medical Institute and is currently supported by grant HG0330-C4 from the National Institutes of Health NCHGR. We thank Drs. John H. Edwards, Peter D'Eustachio, Mary F. Lyon, Phyllis McAlpine, Eva M. Eicher, Joseph H. Nadeau, Josephine Peters, Antony G. Searle, Frank Ruddle, Michael Seldin, Benjamin A. Taylor, Wayne Frankel and Janan Eppig for their help with the map. ADDITIONAL MAPPING INFORMATION NOT PRESENTED ON THE MAP The following list contains ordering and position information that is known, but not illustrated on the map because of the 1cM limit of resolution. The symbol => indicates order and a position less than 1cM from the other locus in the pair; the arrow points to the more distal locus. The symbol == indicates that the order is known but that the orientation relative to the centromere is unknown. Chromosome 1 Grmp => Atplbl => T3z Cd48 = > Bcm 1 Elam, Lnhr, Grmp, Cf 5 => Atplbl => T3z Sap = > Crp Chromosome 2 B2m = > H 3 Il 1 => Prn p Chromosome 3 Cd1a = > Cacy Atplal => Ampd l, Tshb, Ngfb Chromosome 5 Rw = > W (= Kit) Chromosome 6 Hd => [Igk-V11, Igk-V24, Igk-V9-26] => [Igk-V1, Igk-V9] = > [Igk-V4, Igk-V8, Igk-V10, Igk-Vl2, 13, Igk-V19] = > [Igk-V28, Rn7s-6) => Igk-V23 => [Igk-V21, Igk-J, Igk-C] => [Ly 2, Ly 3] => wa 1 Chromosome 7 Ercc 2 = > Xrcc 1 => Otf 2 Tyr => C58v 4 Omp => sh 1 tp => mesd => hsdr 1 => DJCwrl8 => c => Emv 23 => jdf => Mod 2 => eed eed => (D7Cwr11D, D7Cwr2D) => exed D7Cwr11P => D7Cwr18 D7Cwr2P => c Alf => c Chromosome 9 Emv 3 => se Chromosome 14 (Np 1, Np 2, Tcra- C) = > Tcra-V2 = > Tcra-V1 = > Es 10 Chromosome 16 Igl-V2 == Igl-x == Igl-C2 == Igl-C4 == Igl-V1 == Igl-C3 == Igl-C1 Chromosome 17 Tcp 1 = > Fu Tla => Ce 2 => Pgk 2 => Tpx 1 => Mep 1 Rxrb = > H 2Eb X Chromosome Cybb => Syn 1 => Timp => DXWas68 => DXSmh172 Araf => Xlr 1 Hprt => Xlr 2 DXPas8 = > DXPasl4 => DXPasl3 DXS253Eh = > G6pd Rsvp => Cf 8 |
