MouseMine

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Query for phenotype:

• Human genes    Phenotypes of mouse orthologs
• Genes/Features    Phenotypes (MP terms)
• Mammalian phenotypes (MP terms)    Mouse genes and models
• Genotypes    Phenotypes (MP terms)
• Mouse alleles    Mammalian phenotypes (MP terms)
• ID    OntologyTerm
• Lookup    Mammalian phenotypes (MP terms)
• Mammalian phenotypes (MP terms)    Publications

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Query for genome:

• Features    Overlapping features
• Allele categories    Alleles
• Lookup    Features
• Coordinates    Features
• Canonical gene    Strain-specific IDs, biotypes, and locations
• Alleles    Strains that carry those alleles
• Organism    All genes
• Lookup    Mouse Alleles

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Query for disease:

• Mouse features    Human diseases
• Diseases    Mouse genes
• ID    OntologyTerm
• Diseases    Mouse models
• Diseases    Human genes
• Human genes    Diseases terms
• Genotypes    Diseases
• Diseases    Publications

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Query for proteins:

• Gene    Proteins
• Gene    Protein + Domains
• Pathway    Proteins and Genes
• Protein    Genes
• Protein Domain    Proteins and Genes
• Gene    Domains

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Query for homology:

• Human genes    Phenotypes of mouse orthologs
• Genes    Homologs

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Query for function:

• Functions (GO terms and children)    Mouse features
• Mouse features    Functions (GO terms)
• Lookup    Functions (GO terms)
• ID    OntologyTerm
• GO term + Interacting gene (protein-protein)    Genes.
• Functions (GO terms)    Mouse features
• Publication    Functions (GO terms)
• Functions (GO terms)    Publications

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Query for literature:

• Publication    Functions (GO terms)
• Mouse features    Publications
• Publication    Mouse features
• Mammalian phenotypes (MP terms)    Publications
• Publication    Mammalian phenotypes (MP terms)
• Functions (GO terms)    Publications
• Functions (GO terms and children)    Publications

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