Type |
Details |
Score |
GXD Expression |
Probe: |
MGI:3690856 |
Assay Type: |
RT-PCR |
Annotation Date: |
2006-12-18 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1603926 |
|
Stage: |
TS26 |
Assay Id: |
MGI:3691190 |
Age: |
embryonic day 18.5 |
|
|
Specimen Label: |
E18.5 |
Detected: |
true |
Specimen Num: |
12 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1706828 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692441 |
Age: |
postnatal adult |
Image: |
JAX_1305960 |
|
Specimen Label: |
JAX_1305960 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3690859 |
Assay Type: |
RNA in situ |
Annotation Date: |
2006-12-14 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752323 |
Pattern: |
Not Specified |
Stage: |
TS23 |
Assay Id: |
MGI:3690904 |
Age: |
embryonic day 15.0 |
|
|
Specimen Label: |
4H |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1803007 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752323 |
Pattern: |
Uniform |
Stage: |
TS23 |
Assay Id: |
MGI:4824828 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_002482_13 |
|
Specimen Label: |
euxassay_002482_13 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1803007 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752323 |
Pattern: |
Uniform |
Stage: |
TS23 |
Assay Id: |
MGI:4824828 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_002482_14 |
|
Specimen Label: |
euxassay_002482_14 |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1803007 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752323 |
Pattern: |
Uniform |
Stage: |
TS23 |
Assay Id: |
MGI:4824828 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_002482_15 |
|
Specimen Label: |
euxassay_002482_15 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1803007 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752323 |
Pattern: |
Uniform |
Stage: |
TS23 |
Assay Id: |
MGI:4824828 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_002482_16 |
|
Specimen Label: |
euxassay_002482_16 |
Detected: |
true |
Specimen Num: |
4 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1803007 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752323 |
Pattern: |
Uniform |
Stage: |
TS23 |
Assay Id: |
MGI:4824828 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_002482_17 |
|
Specimen Label: |
euxassay_002482_17 |
Detected: |
true |
Specimen Num: |
5 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1803007 |
Assay Type: |
RNA in situ |
Annotation Date: |
2010-09-14 |
Strength: |
Weak |
Sex: |
Not Specified |
Emaps: |
EMAPS:1752323 |
Pattern: |
Uniform |
Stage: |
TS23 |
Assay Id: |
MGI:4824828 |
Age: |
embryonic day 14.5 |
Image: |
euxassay_002482_18 |
|
Specimen Label: |
euxassay_002482_18 |
Detected: |
true |
Specimen Num: |
6 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3690859 |
Assay Type: |
RNA in situ |
Annotation Date: |
2006-12-14 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1684620 |
Pattern: |
Non-Uniform |
Stage: |
TS20 |
Assay Id: |
MGI:3690904 |
Age: |
embryonic day 12.0 |
|
Note: |
Expression was particularly strong in large multinucleated cells, most likely representing megakaryocytes. |
Specimen Label: |
4B |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3690859 |
Assay Type: |
RNA in situ |
Annotation Date: |
2006-12-14 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1684621 |
Pattern: |
Non-Uniform |
Stage: |
TS21 |
Assay Id: |
MGI:3690904 |
Age: |
embryonic day 13.0 |
|
Note: |
Expression was particularly strong in large multinucleated cells, most likely representing megakaryocytes. |
Specimen Label: |
4D |
Detected: |
true |
Specimen Num: |
2 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3690859 |
Assay Type: |
RNA in situ |
Annotation Date: |
2006-12-14 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1684623 |
Pattern: |
Non-Uniform |
Stage: |
TS23 |
Assay Id: |
MGI:3690904 |
Age: |
embryonic day 15.0 |
|
Note: |
Expression was particularly strong in large multinucleated cells, most likely representing megakaryocytes. |
Specimen Label: |
4F |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:3690865 |
Assay Type: |
Immunohistochemistry |
Annotation Date: |
2006-12-14 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1684622 |
Pattern: |
Non-Uniform |
Stage: |
TS22 |
Assay Id: |
MGI:3690912 |
Age: |
embryonic day 14.5 |
|
Note: |
Expression was detected in the liver with particularly high signals in megakaryocytes. |
Specimen Label: |
5E, 5E' |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1797228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692441 |
Age: |
postnatal adult |
Image: |
JAX_1305961 |
|
Specimen Label: |
JAX_1305961 |
Detected: |
true |
Specimen Num: |
3 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1803007 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-01-24 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3266022 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7576142 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
Supplementary table 2 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1803007 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-01-24 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:1754722 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7576142 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
Supplementary table 2 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
Probe: |
MGI:1803007 |
Assay Type: |
RNA in situ |
Annotation Date: |
2024-01-24 |
Strength: |
Present |
Sex: |
Not Specified |
Emaps: |
EMAPS:3518622 |
Pattern: |
Not Specified |
Stage: |
TS22 |
Assay Id: |
MGI:7576142 |
Age: |
embryonic day 14.5 |
|
|
Specimen Label: |
Supplementary table 2 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
GXD Expression |
|
Assay Type: |
In situ reporter (knock in) |
Annotation Date: |
2021-04-16 |
Strength: |
Present |
Sex: |
Male |
Emaps: |
EMAPS:1881228 |
Pattern: |
Not Specified |
Stage: |
TS28 |
Assay Id: |
MGI:6692441 |
Age: |
postnatal adult |
Image: |
JAX_1305959 |
|
Specimen Label: |
JAX_1305959 |
Detected: |
true |
Specimen Num: |
1 |
|
•
•
•
•
•
|
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2000 |
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Title: |
Gene Ontology Annotation by electronic association of SwissProt Keywords with GO terms |
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Publication |
First Author: |
AgBase, BHF-UCL, Parkinson's UK-UCL, dictyBase, HGNC, Roslin Institute, FlyBase and UniProtKB curators |
Year: |
2011 |
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Title: |
Manual transfer of experimentally-verified manual GO annotation data to orthologs by curator judgment of sequence similarity |
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Publication |
First Author: |
The Jackson Laboratory Mouse Radiation Hybrid Database |
Year: |
2004 |
Journal: |
Database Release |
Title: |
Mouse T31 Radiation Hybrid Data Load |
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Publication |
First Author: |
Okazaki Y |
Year: |
2002 |
Journal: |
Nature |
Title: |
Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. |
Volume: |
420 |
Issue: |
6915 |
Pages: |
563-73 |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
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Title: |
Human to Mouse ISO GO annotation transfer |
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Publication |
First Author: |
Diez-Roux G |
Year: |
2011 |
Journal: |
PLoS Biol |
Title: |
A high-resolution anatomical atlas of the transcriptome in the mouse embryo. |
Volume: |
9 |
Issue: |
1 |
Pages: |
e1000582 |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2002 |
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Title: |
Mouse Genome Informatics Computational Sequence to Gene Associations |
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Publication |
First Author: |
Marc Feuermann, Huaiyu Mi, Pascale Gaudet, Dustin Ebert, Anushya Muruganujan, Paul Thomas |
Year: |
2010 |
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Title: |
Annotation inferences using phylogenetic trees |
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Publication |
First Author: |
Bairoch A |
Year: |
1999 |
Journal: |
Database Release |
Title: |
SWISS-PROT Annotated protein sequence database |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2005 |
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Title: |
Obtaining and loading genome assembly coordinates from NCBI annotations |
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Publication |
First Author: |
Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI) |
Year: |
2010 |
Journal: |
Database Download |
Title: |
Consensus CDS project |
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Publication |
First Author: |
Mouse Genome Informatics |
Year: |
2010 |
Journal: |
Database Release |
Title: |
Protein Ontology Association Load. |
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Publication |
First Author: |
Mouse Genome Database and National Center for Biotechnology Information |
Year: |
2000 |
Journal: |
Database Release |
Title: |
Entrez Gene Load |
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Publication |
First Author: |
Allen Institute for Brain Science |
Year: |
2004 |
Journal: |
Allen Institute |
Title: |
Allen Brain Atlas: mouse riboprobes |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Gene 1.0 ST Array Platform |
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Publication |
First Author: |
Mouse Genome Informatics Group |
Year: |
2003 |
Journal: |
Database Procedure |
Title: |
Automatic Encodes (AutoE) Reference |
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Publication |
First Author: |
Mouse Genome Informatics Scientific Curators |
Year: |
2009 |
Journal: |
Database Download |
Title: |
Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome 430 2.0 Array Platform |
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Allele |
Name: |
fermitin family member 3; endonuclease-mediated mutation 2, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Null/knockout |
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Allele |
Name: |
RAS, guanyl releasing protein 2; targeted mutation 1, Ann M Graybiel |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout |
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Allele |
Name: |
fermitin family member 3; targeted mutation 1, Reinhard Fassler |
Allele Type: |
Targeted |
Attribute String: |
Null/knockout, Reporter |
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Protein Coding Gene |
Type: |
protein_coding_gene |
Organism: |
mouse, laboratory |
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Genotype |
Symbol: |
Rasgrp2/Rasgrp2 |
Background: |
Not Specified |
Zygosity: |
hm |
Has Mutant Allele: |
true |
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Genotype |
Symbol: |
Fermt3/Fermt3 |
Background: |
involves: 129S1/Sv * 129X1/SvJ |
Zygosity: |
hm |
Has Mutant Allele: |
true |
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DO Term |
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Allele |
Name: |
fermitin family member 3; endonuclease-mediated mutation 1, Shanghai Model Organisms Center |
Allele Type: |
Endonuclease-mediated |
Attribute String: |
Conditional ready, No functional change |
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Allele |
Name: |
integrin beta 2; targeted mutation 1.1, TaconicArtemis |
Allele Type: |
Targeted |
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Strain |
Attribute String: |
coisogenic, endonuclease-mediated mutation, mutant strain |
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Publication |
First Author: |
Savinko TS |
Year: |
2015 |
Journal: |
J Invest Dermatol |
Title: |
Functional Beta2-Integrins Restrict Skin Inflammation In Vivo. |
Volume: |
135 |
Issue: |
9 |
Pages: |
2249-2257 |
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Publication |
First Author: |
Meakin PJ |
Year: |
2015 |
Journal: |
PLoS One |
Title: |
Mice Lacking beta2-Integrin Function Remain Glucose Tolerant in Spite of Insulin Resistance, Neutrophil Infiltration and Inflammation. |
Volume: |
10 |
Issue: |
9 |
Pages: |
e0138872 |
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Genotype |
Symbol: |
Itgb2/Itgb2 |
Background: |
involves: C57BL/6NTac |
Zygosity: |
hm |
Has Mutant Allele: |
true |
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Publication |
First Author: |
Weinstein EJ |
Year: |
2003 |
Journal: |
Biochim Biophys Acta |
Title: |
URP1: a member of a novel family of PH and FERM domain-containing membrane-associated proteins is significantly over-expressed in lung and colon carcinomas. |
Volume: |
1637 |
Issue: |
3 |
Pages: |
207-16 |
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Publication |
First Author: |
Liu J |
Year: |
2011 |
Journal: |
J Biol Chem |
Title: |
Structural basis of phosphoinositide binding to kindlin-2 protein pleckstrin homology domain in regulating integrin activation. |
Volume: |
286 |
Issue: |
50 |
Pages: |
43334-42 |
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Publication |
First Author: |
Rozario T |
Year: |
2014 |
Journal: |
Mech Dev |
Title: |
Diverse functions of kindlin/fermitin proteins during embryonic development in Xenopus laevis. |
Volume: |
133 |
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Pages: |
203-17 |
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Publication |
First Author: |
Canning CA |
Year: |
2011 |
Journal: |
Dev Dyn |
Title: |
Developmental expression of the fermitin/kindlin gene family in Xenopus laevis embryos. |
Volume: |
240 |
Issue: |
8 |
Pages: |
1958-63 |
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Publication |
First Author: |
Ye F |
Year: |
2014 |
Journal: |
Front Med |
Title: |
Talin and kindlin: the one-two punch in integrin activation. |
Volume: |
8 |
Issue: |
1 |
Pages: |
6-16 |
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
266
|
Fragment?: |
false |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
93
|
Fragment?: |
true |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
72
|
Fragment?: |
true |
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•
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Protein |
Organism: |
Mus musculus/domesticus |
Length: |
258
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Fragment?: |
true |
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Protein Domain |
Type: |
Domain |
Description: |
Fermitin, also known as Unc-112-related protein [], functions as a mediator of integrin inside-out signalling. The recruitment of Fermitin proteins and Talin to the membrane mediates the terminal event of integrin signalling, via interaction with integrin beta subunits []. Fermatin has a FERM domain interrupted with a pleckstrin homology (PH) domain []. Fermitin family homologues (Fermt1, 2, and 3, also known as Kindlins) are each encoded by a different gene. In mammalian studies, Fermt1 is generally expressed in epithelial cells, Fermt2 is expressed in muscle tissues, and Fermt3 is expressed in hematopoietic lineages. Specifically Fermt2 is expressed in smooth and striated muscle tissues in mice and in the somites (a trunk muscle precursor) and neural crest in Xenopus embryos. As such it has been proposed that Fermt2 plays a role in cardiomyocyte and neural crest differentiation. Expression of mammalian Fermt3 is associated with hematopoietic lineages: the anterior ventral blood islands, vitelline veins, and early myeloid cells. In Xenopus embryos this expression, also include the notochord and cement gland [, ].This entry represents the PH domain of fermitins. |
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