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Protein Coding Gene : Kdm5b lysine demethylase 5B

Primary Identifier  MGI:1922855 Organism  mouse, laboratory
Chromosome  1 NCBI Gene Number  75605
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 8.0.0)

Enables histone H3K4 demethylase activity. Involved in negative regulation of DNA-templated transcription. Acts upstream of or within several processes, including cellular response to leukemia inhibitory factor; mammary gland duct morphogenesis; and positive regulation of mammary gland epithelial cell proliferation. Predicted to be located in chromatin; cytosol; and nucleoplasm. Predicted to be active in nucleus. Is expressed in several structures, including alimentary system; central nervous system; early conceptus; genitourinary system; and integumental system. Human ortholog(s) of this gene implicated in autosomal recessive intellectual developmental disorder 65; breast cancer; and high grade glioma. Orthologous to human KDM5B (lysine demethylase 5B).
PHENOTYPE: Mice homozygous for a gene trapped allele exhibit decreased body weight, background-sensitive premature mortality, decreased female fertility, delayed mammary gland development, decreased serum estradiol levels, and reduced mammary epithelial cell proliferation in early puberty. [provided by MGI curators]
  • synonyms:
  • putative DNA/chromatin binding motif 1,
  • Jarid1b,
  • DNA segment, Chr 1, ERATO Doi 202, expressed,
  • PLU-1,
  • Rb-Bp2,
  • MGI:2138618,
  • expressed sequence AW556288,
  • MGI:1917371,
  • lysine demethylase 5B,
  • Plu1,
  • RIKEN cDNA 2210016I17 gene,
  • AW556288,
  • RIKEN cDNA 2010009J12 gene,
  • 2210016I17Rik,
  • jumonji, AT rich interactive domain 1B (Rbp2 like),
  • 2010009J12Rik,
  • D1Ertd202e,
  • Kdm5b,
  • MGI:1098818

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Genome

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0 CDSs

0 Exons

0 Genomic Clusters

3 Involved In Mutations

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0 Transcripts

0 Transgenic Expressors

0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

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Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

8 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

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Disease

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0 Driver For