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Polymorphic Pseudogene : H2-Ea histocompatibility 2, class II antigen E alpha

Primary Identifier  MGI:95900 Organism  mouse, laboratory
Chromosome  17 Mgi Type  polymorphic pseudogene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 8.0.0)

Predicted to enable several functions, including MHC class II protein complex binding activity; T cell receptor binding activity; and peptide antigen binding activity. Acts upstream of or within antigen processing and presentation of exogenous peptide antigen via MHC class II; immunoglobulin mediated immune response; and positive regulation of immune response. Located in external side of plasma membrane. Human ortholog(s) of this gene implicated in Parkinson's disease (multiple); allergic disease; asthma; and autoimmune disease (multiple). Orthologous to human HLA-DRA (major histocompatibility complex, class II, DR alpha).
specificity  The differential expression of H2-Ea is caused by a loss-of-function deletion of about 600 bp in the promoter and first exon of the H2-Ea gene that occurs in strains of the H2b but not in H2k or H2d haplotype (Jones PP, Murphy DB, McDevitt HO Variable synthesis and expression of E alpha and Ae (E beta) Ia polypeptide chains in mice of different H-2 haplotypes. Immunogenetics 1981;12:321-37.) C57BL/6, C57BL/10, C57L/J, LP/J, and 129 mice are among the strains that carry H2<sup>b</sup> and have a deletion of part of H2-Ea. A/He, A/J carry H2<sup>a</sup> and DBA/2, NZB, C57BL/KsJ, and BALB/c mice carry H2<sup>d</sup>. CBA/J, MA/My, AKR, C57BR/cdJ, RF/J, C58/J, and C3H(C3H/He, C3HeB/FeJ) mice carry H2<sup>k</sup>. These strains and others have an intact H2-Ea gene.
  • synonyms:
  • histocompatibility 2, class II antigen E alpha, pseudogene,
  • Ia3,
  • H2-Ea-ps,
  • histocompatibility 2, class II antigen E alpha,
  • MGD-MRK-11051,
  • expressed sequence AI323765,
  • MGI:6360898,
  • H2-Ea,
  • Ia-3,
  • histocompatibility 2, class II antigen Ealpha,
  • MGD-MRK-10496,
  • I-Ealpha,
  • MGI:2146825,
  • AI323765,
  • MGD-MRK-10383,
  • H-2Ea,
  • I region-associated antigen 3,
  • MGD-MRK-11046

Features --> Cross References

Genome

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0 CDSs

0 Exons

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3 Involved In Mutations

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0 Transcripts

4 Transgenic Expressors

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

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Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

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Genes --> Homologs

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Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

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Disease

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2 Driver For