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Protein Coding Gene : Col3a1 collagen, type III, alpha 1

Primary Identifier  MGI:88453 Organism  mouse, laboratory
Chromosome  1 NCBI Gene Number  12825
Mgi Type  protein coding gene
description  FUNCTION: Automated description from the Alliance of Genome Resources (Release 9.1.0)

Enables SMAD binding activity. Involved in several processes, including extracellular matrix organization; neurogenesis; and skeletal system development. Acts upstream of or within several processes, including cellular response to amino acid stimulus; collagen fibril organization; and digestive tract development. Located in extracellular matrix. Part of collagen type III trimer. Is expressed in several structures, including central nervous system; embryo mesenchyme; genitourinary system; heart and pericardium; and integumental system. Used to study systemic scleroderma and vascular type Ehlers-Danlos syndrome. Human ortholog(s) of this gene implicated in Ehlers-Danlos syndrome; Ehlers-Danlos syndrome hypermobility type; end stage renal disease; and vascular type Ehlers-Danlos syndrome. Orthologous to human COL3A1 (collagen type III alpha 1 chain).
PHENOTYPE: Most homozygous mutants die within 48 hours after birth. Surviving mutants have reduced body size, skin lesions, enlarged intestines, and die by 6 months of age from ruptured blood vessels. Occasionally intestinal rupture also results in early death. Heterozygotes exhibit tight skin. [provided by MGI curators]
  • synonyms:
  • MGD-MRK-2065,
  • MGI:98851,
  • AW550625,
  • MGI:2138608,
  • Col3a1,
  • Tsk2,
  • MGD-MRK-15278,
  • tight skin 2,
  • MGD-MRK-15277,
  • Tsk-2,
  • MGD-MRK-2064,
  • procollagen type III, alpha 1,
  • expressed sequence AW550625,
  • collagen, type III, alpha 1,
  • Col3a-1

Features --> Cross References

Genome

Sequence Feature Displayer

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0 Canonical

0 CDSs

0 Exons

0 Genomic Clusters

1 Involved In Mutations

0 Strain

0 Transcripts

0 Transgenic Expressors

0 UTRs

Canonical gene --> CDSs in specific strains.

Canonical gene --> Exons in specific strains

Canonical gene --> Strain-specific IDs, biotypes, and locations

Canonical gene --> Transcripts in specific strains.

Features --> Overlapping features

Proteins

Gene --> Proteins

Function

Mouse features --> Functions (GO terms)

Homology

Genes --> Homologs

Interactions

22 Pathways

0 Targeted By

Gene --> Protein-Protein Interactions

Expression

Gene --> Expression annotations

Phenotype

Genes/Features --> Phenotypes (MP terms)

Disease

Mouse features --> Human diseases

Literature

Mouse features --> Publications

 

Other

1 Driver For