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Publication : Integrated analysis of proteome and transcriptome changes in the mucopolysaccharidosis type VII mouse hippocampus.

First Author  Parente MK Year  2016
Journal  Mol Genet Metab Volume  118
Issue  1 Pages  41-54
PubMed ID  27053151 Mgi Jnum  J:232108
Mgi Id  MGI:5776062 Doi  10.1016/j.ymgme.2016.03.003
Citation  Parente MK, et al. (2016) Integrated analysis of proteome and transcriptome changes in the mucopolysaccharidosis type VII mouse hippocampus. Mol Genet Metab 118(1):41-54
abstractText  Mucopolysaccharidosis type VII (MPS VII) is a lysosomal storage disease caused by the deficiency of beta-glucuronidase. In this study, we compared the changes relative to normal littermates in the proteome and transcriptome of the hippocampus in the C57Bl/6 mouse model of MPS VII, which has well-documented histopathological and neurodegenerative changes. A completely different set of significant changes between normal and MPS VII littermates were found in each assay. Nevertheless, the functional annotation terms generated by the two methods showed agreement in many of the processes, which also corresponded to known pathology associated with the disease. Additionally, assay-specific changes were found, which in the proteomic analysis included mitochondria, energy generation, and cytoskeletal differences in the mutant, while the transcriptome differences included immune, vesicular, and extracellular matrix changes. In addition, the transcriptomic changes in the mutant hippocampus were concordant with those in a MPS VII mouse caused by the same mutation but on a different background inbred strain.
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