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Publication : A cellular and molecular spatial atlas of dystrophic muscle.

First Author  Stec MJ Year  2023
Journal  Proc Natl Acad Sci U S A Volume  120
Issue  29 Pages  e2221249120
PubMed ID  37410813 Mgi Jnum  J:342379
Mgi Id  MGI:7548275 Doi  10.1073/pnas.2221249120
Citation  Stec MJ, et al. (2023) A cellular and molecular spatial atlas of dystrophic muscle. Proc Natl Acad Sci U S A 120(29):e2221249120
abstractText  Asynchronous skeletal muscle degeneration/regeneration is a hallmark feature of Duchenne muscular dystrophy (DMD); however, traditional -omics technologies that lack spatial context make it difficult to study the biological mechanisms of how asynchronous regeneration contributes to disease progression. Here, using the severely dystrophic D2-mdx mouse model, we generated a high-resolution cellular and molecular spatial atlas of dystrophic muscle by integrating spatial transcriptomics and single-cell RNAseq datasets. Unbiased clustering revealed nonuniform distribution of unique cell populations throughout D2-mdx muscle that were associated with multiple regenerative timepoints, demonstrating that this model faithfully recapitulates the asynchronous regeneration observed in human DMD muscle. By probing spatiotemporal gene expression signatures, we found that propagation of inflammatory and fibrotic signals from locally damaged areas contributes to widespread pathology and that querying expression signatures within discrete microenvironments can identify targetable pathways for DMD therapy. Overall, this spatial atlas of dystrophic muscle provides a valuable resource for studying DMD disease biology and therapeutic target discovery.
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