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Publication : Modulatory profiling identifies mechanisms of small molecule-induced cell death.

First Author  Wolpaw AJ Year  2011
Journal  Proc Natl Acad Sci U S A Volume  108
Issue  39 Pages  E771-80
PubMed ID  21896738 Mgi Jnum  J:176584
Mgi Id  MGI:5292272 Doi  10.1073/pnas.1106149108
Citation  Wolpaw AJ, et al. (2011) Modulatory profiling identifies mechanisms of small molecule-induced cell death. Proc Natl Acad Sci U S A 108(39):E771-80
abstractText  Cell death is a complex process that plays a vital role in development, homeostasis, and disease. Our understanding of and ability to control cell death is impeded by an incomplete characterization of the full range of cell death processes that occur in mammalian systems, especially in response to exogenous perturbations. We present here a general approach to address this problem, which we call modulatory profiling. Modulatory profiles are composed of the changes in potency and efficacy of lethal compounds produced by a second cell death-modulating agent in human cell lines. We show that compounds with the same characterized mechanism of action have similar modulatory profiles. Furthermore, clustering of modulatory profiles revealed relationships not evident when clustering lethal compounds based on gene expression profiles alone. Finally, modulatory profiling of compounds correctly predicted three previously uncharacterized compounds to be microtubule-destabilizing agents, classified numerous compounds that act nonspecifically, and identified compounds that cause cell death through a mechanism that is morphologically and biochemically distinct from previously established ones.
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