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Publication : The proteomic landscape of synaptic diversity across brain regions and cell types.

First Author  van Oostrum M Year  2023
Journal  Cell Volume  186
Issue  24 Pages  5411-5427.e23
PubMed ID  37918396 Mgi Jnum  J:350851
Mgi Id  MGI:7561353 Doi  10.1016/j.cell.2023.09.028
Citation  van Oostrum M, et al. (2023) The proteomic landscape of synaptic diversity across brain regions and cell types. Cell 186(24):5411-5427.e23
abstractText  Neurons build synaptic contacts using different protein combinations that define the specificity, function, and plasticity potential of synapses; however, the diversity of synaptic proteomes remains largely unexplored. We prepared synaptosomes from 7 different transgenic mouse lines with fluorescently labeled presynaptic terminals. Combining microdissection of 5 different brain regions with fluorescent-activated synaptosome sorting (FASS), we isolated and analyzed the proteomes of 18 different synapse types. We discovered approximately 1,800 unique synapse-type-enriched proteins and allocated thousands of proteins to different types of synapses (https://syndive.org/). We identify shared synaptic protein modules and highlight the proteomic hotspots for synapse specialization. We reveal unique and common features of the striatal dopaminergic proteome and discover the proteome signatures that relate to the functional properties of different interneuron classes. This study provides a molecular systems-biology analysis of synapses and a framework to integrate proteomic information for synapse subtypes of interest with cellular or circuit-level experiments.
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