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Publication : Bacterial metabolism of bile acids promotes generation of peripheral regulatory T cells.

First Author  Campbell C Year  2020
Journal  Nature Volume  581
Issue  7809 Pages  475-479
PubMed ID  32461639 Mgi Jnum  J:291334
Mgi Id  MGI:6446563 Doi  10.1038/s41586-020-2193-0
Citation  Campbell C, et al. (2020) Bacterial metabolism of bile acids promotes generation of peripheral regulatory T cells. Nature 581(7809):475-479
abstractText  Intestinal health relies on the immunosuppressive activity of CD4(+) regulatory T (Treg) cells(1). Expression of the transcription factor Foxp3 defines this lineage, and can be induced extrathymically by dietary or commensal-derived antigens in a process assisted by a Foxp3 enhancer known as conserved non-coding sequence 1 (CNS1)(2-4). Products of microbial fermentation including butyrate facilitate the generation of peripherally induced Treg (pTreg) cells(5-7), indicating that metabolites shape the composition of the colonic immune cell population. In addition to dietary components, bacteria modify host-derived molecules, generating a number of biologically active substances. This is epitomized by the bacterial transformation of bile acids, which creates a complex pool of steroids(8) with a range of physiological functions(9). Here we screened the major species of deconjugated bile acids for their ability to potentiate the differentiation of pTreg cells. We found that the secondary bile acid 3beta-hydroxydeoxycholic acid (isoDCA) increased Foxp3 induction by acting on dendritic cells (DCs) to diminish their immunostimulatory properties. Ablating one receptor, the farnesoid X receptor, in DCs enhanced the generation of Treg cells and imposed a transcriptional profile similar to that induced by isoDCA, suggesting an interaction between this bile acid and nuclear receptor. To investigate isoDCA in vivo, we took a synthetic biology approach and designed minimal microbial consortia containing engineered Bacteroides strains. IsoDCA-producing consortia increased the number of colonic RORgammat-expressing Treg cells in a CNS1-dependent manner, suggesting enhanced extrathymic differentiation.
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