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Publication : CRISPR/Cas9 interrogation of the mouse Pcdhg gene cluster reveals a crucial isoform-specific role for Pcdhgc4.

First Author  Garrett AM Year  2019
Journal  PLoS Genet Volume  15
Issue  12 Pages  e1008554
PubMed ID  31877124 Mgi Jnum  J:285314
Mgi Id  MGI:6386647 Doi  10.1371/journal.pgen.1008554
Citation  Garrett AM, et al. (2019) CRISPR/Cas9 interrogation of the mouse Pcdhg gene cluster reveals a crucial isoform-specific role for Pcdhgc4. PLoS Genet 15(12):e1008554
abstractText  The mammalian Pcdhg gene cluster encodes a family of 22 cell adhesion molecules, the gamma-Protocadherins (gamma-Pcdhs), critical for neuronal survival and neural circuit formation. The extent to which isoform diversity-a gamma-Pcdh hallmark-is required for their functions remains unclear. We used a CRISPR/Cas9 approach to reduce isoform diversity, targeting each Pcdhg variable exon with pooled sgRNAs to generate an allelic series of 26 mouse lines with 1 to 21 isoforms disrupted via discrete indels at guide sites and/or larger deletions/rearrangements. Analysis of 5 mutant lines indicates that postnatal viability and neuronal survival do not require isoform diversity. Surprisingly, given reports that it might not independently engage in trans-interactions, we find that gammaC4, encoded by Pcdhgc4, is the only critical isoform. Because the human orthologue is the only PCDHG gene constrained in humans, our results indicate a conserved gammaC4 function that likely involves distinct molecular mechanisms.
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