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Publication : Time-dependent regulation of cytokine production by RNA binding proteins defines T cell effector function.

First Author  Popović B Year  2023
Journal  Cell Rep Volume  42
Issue  5 Pages  112419
PubMed ID  37074914 Mgi Jnum  J:351831
Mgi Id  MGI:7491479 Doi  10.1016/j.celrep.2023.112419
Citation  Popovic B, et al. (2023) Time-dependent regulation of cytokine production by RNA binding proteins defines T cell effector function. Cell Rep 42(5):112419
abstractText  Potent T cell responses against infections and malignancies require a rapid yet tightly regulated production of toxic effector molecules. Their production level is defined by post-transcriptional events at 3' untranslated regions (3' UTRs). RNA binding proteins (RBPs) are key regulators in this process. With an RNA aptamer-based capture assay, we identify >130 RBPs interacting with IFNG, TNF, and IL2 3' UTRs in human T cells. RBP-RNA interactions show plasticity upon T cell activation. Furthermore, we uncover the intricate and time-dependent regulation of cytokine production by RBPs: whereas HuR supports early cytokine production, ZFP36L1, ATXN2L, and ZC3HAV1 dampen and shorten the production duration, each at different time points. Strikingly, even though ZFP36L1 deletion does not rescue the dysfunctional phenotype, tumor-infiltrating T cells produce more cytokines and cytotoxic molecules, resulting in superior anti-tumoral T cell responses. Our findings thus show that identifying RBP-RNA interactions reveals key modulators of T cell responses in health and disease.
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