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Publication : Cln5 represents a new type of cysteine-based S-depalmitoylase linked to neurodegeneration.

First Author  Luebben AV Year  2022
Journal  Sci Adv Volume  8
Issue  15 Pages  eabj8633
PubMed ID  35427157 Mgi Jnum  J:343112
Mgi Id  MGI:7266015 Doi  10.1126/sciadv.abj8633
Citation  Luebben AV, et al. (2022) Cln5 represents a new type of cysteine-based S-depalmitoylase linked to neurodegeneration. Sci Adv 8(15):eabj8633
abstractText  Genetic CLN5 variants are associated with childhood neurodegeneration and Alzheimer's disease; however, the molecular function of ceroid lipofuscinosis neuronal protein 5 (Cln5) is unknown. We solved the Cln5 crystal structure and identified a region homologous to the catalytic domain of members of the N1pC/P60 superfamily of papain-like enzymes. However, we observed no protease activity for Cln5; and instead, we discovered that Cln5 and structurally related PPPDE1 and PPPDE2 have efficient cysteine palmitoyl thioesterase (S-depalmitoylation) activity using fluorescent substrates. Mutational analysis revealed that the predicted catalytic residues histidine-166 and cysteine-280 are critical for Cln5 thioesterase activity, uncovering a new cysteine-based catalytic mechanism for S-depalmitoylation enzymes. Last, we found that Cln5-deficient neuronal progenitor cells showed reduced thioesterase activity, confirming live cell function of Cln5 in setting S-depalmitoylation levels. Our results provide new insight into the function of Cln5, emphasize the importance of S-depalmitoylation in neuronal homeostasis, and disclose a new, unexpected enzymatic function for the N1pC/P60 superfamily of proteins.
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